Template:MT3DMS Advanced Transport Workflow

1. Open an existing MT3DMS simulation.

1. Open the basic transport package for MT3DMS. Select the MT3DMS | Basic Transport Package menu command if the dialog does not appear when creating the simulation. In the Basic Transport Package dialog, select the MT3DMS option if this has not already been selected. 2. Define Species. In the Basic Transport Package dialog, select the Species button. Define the number and name of each species in the ''Define Species dialog. 3. Set stress periods for MT3DMS. In the Basic Transport Package dialog, select the Stress Period button. Assign stress period parameters in the Stress Periods dialog. 4. Setup output control. In the Basic Transport Package dialog, select the Output Control button. Select output options in the Output Control dialog. 5. Select MT3DMS packages. In the Basic Transport Package dialog, select the Packages button. Select packages in the MTD3DMS/RT3D Packages dialog.

2. Add dispersion
1. Activate the dispersion package. Select MT3DMS|Basic Transport Package to open the Basic Transport Package dialog. Select the Packages... button. In the Packages dialog, turn on Dispersion package. 2. Define dispersion values Select the MT3DMS | Dispersion Package menu command. Set dispersion parameters in the Dispersion Package dialog.

3. Sorption
Select MT3DMS|Basic Transport Package to open the Basic Transport Package dialog. Select Packages... and turn on Chemical reaction package. Select MT3DMS|Chemical Reaction package... to open the Chemical Reaction Package dialog.

4. Duel Domain Transport
Select MT3DMS|Basic Transport Package to open the Basic Transport Package dialog. Select Packages... and turn on Chemical reaction package. Select MT3DMS|Chemical Reaction package... to open the Chemical Reaction Package dialog. Select Dual-domain mass transfer (without sorption) from the Sorption drop-down.

5. Run MT3DMS
Save the project. Run MT3DMS .

6. Visualize the solution.

1. Change display options. 1. Set display options. Open the Display Options dialog. Set the general display options. Set general lighting options. Set display options for each module that is being used. Set contour options. Set vector options. 2. View display. Use the Rotate , Pan , and Zoom tools. Use the View menu commands found in the Display menu. Use the Frame command to center and resize the display as needed. 3. Adjust display. Display may need to be adjusted during the remainder of the project. Use the Display Options dialog and viewing tools as needed. Use the Frame command to center and resize the display as needed. 2. Change contour options. Turn on Contours in the Display Options dialog and set contour options. The "Color Fill" option is recommended for this. Look for inconsistent points (points with values much higher/lower than their neighbors or regions where no data points exist). Verify that the region being modeled is covered by the elevation/depth data and there are no holes. 3. Create a plot. 1. Start the plot wizard. Select the Display | Plot Wizard menu command. Note that some plots require an observation coverage exist in the project. 2. Select available plot type. 1. Computed vs. Observed Data plots. 1. Computed vs. Observed Data. Select Display | Plot Wizard to start the Plot Wizard. Select the "Computed vs. Observed Data" option on the left and click Next. Specify plot options in step 2 of the Plot Wizard then click Finish. Review plot window. 2. Computed vs. Observed Data (Weighted). Select Display | Plot Wizard to start the Plot Wizard. Select the "Computed vs. Observed Data (Weighted)" option on the left and click Next. Specify plot options in step 2 of the Plot Wizard then click Finish. Review plot window. 2. Residual vs. Observed Data plots. 1. Residual vs. Observed Data. Select Display | Plot Wizard to start the Plot Wizard. Select the "Residual vs. Observed" option on the left and click Next. Specify plot options in step 2 of the Plot Wizard then click Finish. Review plot window. 2. Residual vs. Observed Data (Weighted). Select Display | Plot Wizard to start the Plot Wizard. Select the "Residual vs. Observed (Weighted)" option on the left and click Next. Specify plot options in step 2 of the Plot Wizard then click Finish. Review plot window. 3. Parameter Sensitivity plot. Select Display | Plot Wizard to start the Plot Wizard. Select the "Parameter Sensitivity" option on the left and click Next. Specify plot options in step 2 of the Plot Wizard then click Finish. Review plot window. 4. Error vs. Simulation plot. Select Display | Plot Wizard to start the Plot Wizard. Select the "Error vs. Simulation" option on the left and click Next. Specify plot options in step 2 of the Plot Wizard then click Finish. Review plot window. 5. Error vs. Time Step plot. Select Display | Plot Wizard to start the Plot Wizard. Select the "Error vs. Time Step" option on the left and click Next. Specify plot options in step 2 of the Plot Wizard then click Finish. Review plot window. 6. Error Summary plot. Select Display | Plot Wizard to start the Plot Wizard. Select the "Error Summary" option on the left and click Next. Specify plot options in step 2 of the Plot Wizard then click Finish. Review plot window. 7. Time Series plot. Select Display | Plot Wizard to start the Plot Wizard. Select the "Time Series" option on the left and click Next. Specify plot options in step 2 of the Plot Wizard then click Finish. Review plot window. 8. Active Dataset Time Series plot. Select a dataset in Project Explorer. Select cells in the project. Select Display | Plot Wizard to start the Plot Wizard. Select the "Active Dataset Time Series" option on the left and click Next. Specify plot options in step 2 of the Plot Wizard then click Finish. Review plot window. 9. S/S Flow vs. Time plot. Select Display | Plot Wizard to start the Plot Wizard. Select the "S/S Flow vs. Time" option on the left and click Next. Specify plot options in step 2 of the Plot Wizard then click Finish. Review plot window. 10. Flow Budget vs. Time plot. Select Display | Plot Wizard to start the Plot Wizard. Select the "Flow Budget vs. Time" option on the left and click Next. Specify plot options in step 2 of the Plot Wizard then click Finish. Review plot window. 11. Gage Package Value vs. Time plot. Select Display | Plot Wizard to start the Plot Wizard. Select the "Gage Package Value vs. Time" option on the left and click Next. Specify plot options in step 2 of the Plot Wizard then click Finish. Review plot window. 4. Create an animation. Select a solution dataset and use the Display | Animate menu command. Use the Animation Wizard to specify the animation parameters. Save and view the animation file. 5. Review the zone and flow budgets. Select MODFLOW | Flow Budget.... Review the flow data on the Cells and Zones tabs in the Flow Budget dialog. Generate water budget data on the USGS ZONEBUDGET tab.