GMS:GMS User Manual: Difference between revisions

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-{{saved_book}}
+[[Category:Books]]
+<!--{{saved_book
+ |title=GMS User Manual (vDev)
+ |subtitle=The Groundwater Modeling System
+ |cover-image=
+ |cover-color=
+}}-->
-== GMS User Manual (v8.1) ==
+== GMS User Manual ==
-=== Geo-technical Engineering ===
+=== The Groundwater Modeling System ===
+;1. Learning GMS
-;1 Learning GMS
 :[[GMS:What Is GMS|What is GMS?]]
+:[[GMS:The GMS Window|The GMS Window]]
+:[[GMS:Toolbars|Toolbars]]
+:[[GMS:Project Explorer|Project Explorer]]
 :[[GMS:Tutorials|Tutorials]]
-:[[GMS:Quick Tour - Graphics Window | Quick Tour - Graphics Window]]
+----
-:[[GMS:Quick Tour - GUI | Quick Tour - GUI]]
+;2. Set Up
-:[[GMS:Quick Tour - Main Toolbar | Quick Tour - Main Toolbar]]
+:[[GMS:64-bit|64-bit]]
-:[[GMS:Quick Tour - Mini Grid Plot | Quick Tour - Mini Grid Plot]]
+:[[License Agreement|License Agreement]]
-:[[GMS:Quick Tour - Project Explorer | Quick Tour - Project Explorer]]
-:[[GMS:Quick Tour - Status Bar | Quick Tour - Status Bar]]
-:[http://aquaveo.invisionzone.com/index.php GMS Support Forums]
-:[http://www.aquaveo.com/technical-support/ Support Information]
-;2 Set Up
-:[[System Requirements|System Requirements]]
 :[[GMS:Registering GMS | Registering GMS]]
-:[[License Agreement|License Agreement]]
+:[[GMS:Community Edition|Community Edition]]
 :[[Graphics Card Troubleshooting|Graphics Card Troubleshooting]]
-:[[USB Network Lock|USB Network Lock]]
+:[[GMS:Report_A_Bug|Reporting Bugs]]
-:[[XMS:Register|Register]]
+----
-:[http://www.ems-i.com/Software/software.html Licensing Information]
+;3. General Tools
+;3.1. The File Menu
-;3 Modules
+:[[GMS:File Menu|The File Menu]]
-;3.1 TIN Module
+;3.2. The Edit Menu
+:[[GMS:Edit Menu|The Edit Menu]]
+:[[GMS:Units | Units]]
+:[[GMS:Preferences|Preferences]]
+:[[GMS:Materials|Materials]]
+:[[GMS:Material Set|Material Set]]
+:[[Single Point Conversion|Single Point Conversion]]
+;3.2.1. Coordinate Systems
+:[[Projections|Projections]]
+:[[CPP Coordinate System|CPP Coordinate System]]
+:[[Geographic Coordinate System|Geographic Coordinate System]]
+:[[Local Coordinate System|Local Coordinate System]]
+:[[GMS:Transform|Transform]]
+;3.3. The Display Menu
+:[[GMS:Display Menu|The Display Menu]]
+:[[GMS:Contour Options|Contour Options]]
+:[[GMS:Animations | Animations]]
+:[[GMS:Color Ramp|Color Ramp]]
+;3.3.1. Display Options
+:[[GMS:Display Options|Display Options]]
+:[[GMS:Drawing Grid Options|Drawing Grid Options]]
+:[[GMS:Vectors|Vectors]]
+:[[Lighting Options|Lighting Options]]
+:[[GMS:Plot Axes|Plot Axes]]
+;3.4. Other Tools
+:[[GMS:Annotations|Annotations]]
+:[[GMS:CAD Options|CAD Options]]
+:[[GMS:Cross Sections|Cross Sections]]
+:[[GMS:Datasets|Datasets]]
+:[[Data Calculator|Data Calculator]]
+:[[GMS:Display Theme|Display Theme]]
+:[[XY Series Editor|XY Series Editor]]
+----
+;4. Interpolation
+;4.1. Introduction
+:[[GMS:Interpolation | Interpolation]]
+:[[GMS:Interpolation Commands|Interpolation Menu]]
+:[[GMS:3D Interpolation Options|3D Interpolation Options]]
+;4.2. Linear
+:[[GMS:Linear | Linear]]
+;4.3. Inverse Distance Weighted
+:[[GMS:Inverse Distance Weighted | Inverse Distance Weighted]]
+:[[GMS:Shepard's Method|Shepard's method]]
+:[[GMS:Gradient Plane Nodal Functions | Gradient Plane Nodal Functions]]
+:[[GMS:Quadratic Nodal Functions | Quadratic Nodal Functions]]
+:[[GMS:Subset Definition | Subset Definition]]
+:[[GMS:Computation of Interpolation Weights|Computation of Interpolation Weights]]
+;4.4. Clough-Tocher
+:[[GMS:Clough-Tocher|Clough-Tocher]]
+;4.5. Natural Neighbor
+:[[GMS:Natural Neighbor|Natural Neighbor]]
+;4.6. Kriging
+:[[GMS:Kriging|Kriging]]
+:[[GMS:Kriging Options|Kriging Options]]
+:[[GMS:3D Kriging|3D Kriging]]
+:[[GMS:Variogram Editor|Variogram Editor]]
+;4.7. Jackknifing
+:[[GMS:Jackknifing|Jackknifing]]
+----
+;5. Modules
+;5.1. TIN Module
 :[[GMS:TIN Module|TIN Module]]
+:[[GMS:TIN Commands|TINs Menu]]
 :[[GMS:Creating a TIN|Creating a TIN]]
 :[[GMS:Editing a TIN|Editing a TIN]]
-:[[GMS:Converting TINS to Other Data Types|Converting TINS to Other Data Types]]
-:[[GMS:Building Solids and 3D Meshes with TINs|Building Solids and 3D Meshes with TINs]]
 :[[GMS:TIN Settings|TIN Settings]]
 :[[GMS:TIN Display Options|TIN Display Options]]
 :[[GMS:TIN Tool Palette|TIN Tool Palette]]
+:[[GMS:Converting TINS to Other Data Types|Converting TINS to Other Data Types]]
+:[[GMS:Building Solids and 3D Meshes with TINs|Building Solids and 3D Meshes with TINs]]
+:[[GMS:Triangulation|Triangulation]]
 :[[TIN Files|TIN Files]]
-;3.2 Boreholes Module
+;5.2. Boreholes Module
-:[[GMS:Boreholes|Boreholes Module]]
+:[[GMS:Boreholes|Boreholes]]
+:[[GMS:Boreholes Menu|Boreholes Menu]]
 :[[GMS:Creating and Editing Boreholes|Creating and Editing Boreholes]]
+:[[GMS:Borehole Display Options|Borehole Display Options]]
+:[[GMS:Borehole Tool Palette|Borehole Tool Palette]]
 :[[GMS:Borehole Hydrogeologic Units|Borehole Hydrogeologic Units]]
 :[[GMS:Converting Borehole Data|Converting Borehole Data]]
 :[[GMS:Borehole Cross Sections|Borehole Cross Sections]]
-:[[GMS:Borehole Tool Palette|Borehole Tool Palette]]
+;5.2.1. Horizons
+:[[GMS:Horizons|Horizons]]
+:[[GMS:Horizon Conceptual Model|Horizon Conceptual Model]]
+:[[GMS:Horizons Applications|Horizons Applications]]
+:[[GMS:Horizons to HUF|Horizons to HUF]]
+:[[GMS:Horizons Wizard|Horizons Wizard]]
+:[[GMS:Including Borehole Cross Sections|Including Borehole Cross Sections]]
+:[[GMS:Horizons to Solids|Horizons to Solids]]
+:[[GMS:Horizons to 3D Mesh|Horizons to 3D Mesh]]
-;3.3 Solid Module
+;5.3. Solid Module
 :[[GMS:Solid Module|Solid Module]]
+:[[GMS:Solid Commands|Solids Menu]]
 :[[GMS:Solid Properties|Solid Properties]]
 :[[GMS:Solid Primitives|Solid Primitives]]
-:[[GMS:Cross Sections#Solid Cross Sections|Solid Cross Sections]]
+:[[GMS:Solid Display Options|Solid Display Options]]
-:[[GMS:Horizons to Solids|Horisons to Solids]]
+:[[GMS:Solid Module Tool Palette|Solid Module Tool Palette]]
+:[[GMS:Set Operations|Set Operations]]
+:[[GMS:Solids to Layered Mesh|Solids to Layered Mesh]]
 :[[GMS:Solids to HUF|Solids to HUF]]
-:[[GMS:Solids to Layered Mesh|Solids to Layered Mesh]]
 :[[GMS:Solids to MODFLOW Command|Solids to MODFLOW Command]]
-:[[GMS:Solid Display Options|Solid Display Options]]
+:[[GMS:Boundary Matching|Boundary Matching]]
-:[[GMS:Solid Module Tool Palette|Solid Module Tool Palette]]
+:[[GMS:Grid Overlay|Grid Overlay]]
+:[[GMS:Grid Overlay with Keq|Grid Overlay with Keq]]
-;3.4 2D Mesh Module
+;5.4. 2D Mesh Module
 :[[GMS:2D Mesh Module|2D Mesh Module]]
+:[[GMS:2D Mesh Commands|2D Mesh Menu]]
 :[[GMS:Creating a 2D Mesh|Creating a 2D Mesh]]
 :[[GMS:Editing 2D Meshes|Editing 2D Meshes]]
 :[[GMS:2D Mesh Settings|2D Mesh Settings]]
+:[[GMS:2D Mesh Display Options|2D Mesh Display Options]]
+:[[GMS:2D Mesh Tool Palette|2D Mesh Tool Palette]]
 :[[GMS:Converting a 2D Mesh to other types of Data|Converting a 2D Mesh to other types of Data]]
 :[[Element types|Element types]]
-:[[GMS:2D Mesh Display Options|2D Mesh Display Options]]
 :[[GMS:2D Mesh Polygon Attributes|2D Mesh Polygon Attributes]]
-:[[GMS:2D Mesh Tool Palette|2D Mesh Tool Palette]]
-;3.5 2D Grid Module
+;5.5. 2D Grid Module
 :[[GMS:2D Grid Module|2D Grid Module]]
-:[[GMS:2D Grid Types|2D Grid Types]]
+:[[GMS:2D Grid Menu|2D Grid Menu]]
-:[[GMS:Creating and Editing 2D Grids|Creating and Editing 2D Grids]]
+:[[GMS:2D Grid Creation and Editing|2D Grid Creation and Editing]]
-:[[GMS:Converting 2D Grids|Converting 2D Grids]]
 :[[GMS:2D Grid Display Options|2D Grid Display Options]]
 :[[GMS:2D Grid Tool Palette|2D Grid Tool Palette]]
+:[[GMS:Converting 2D Grids|Converting 2D Grids]]
-;3.6 2D Scatter Point Module
+;5.6. 2D Scatter Point Module
 :[[GMS:2D Scatter Point Module|2D Scatter Point Module]]
-:[[GMS:Creating and Editing 2D Scatter Point Sets|Creating and Editing 2D Scatter Point Sets]]
+:[[GMS:2D Scatter Point Commands|2D Scatter Point Commands]]
+:[[GMS:2D Scatter Point Set Creation and Editing|2D Scatter Point Set Creation and Editing]]
+:[[GMS:2D Scatter Point Display Options|2D Scatter Point Display Options]]
+:[[GMS:2D Scatter Point Tool Palette|2D Scatter Point Tool Palette]]
 :[[GMS:Interpolating with 2D Scatter Points|Interpolating with 2D Scatter Points]]
 :[[GMS:Converting 2D Scatter Points to Other Types of Data|Converting 2D Scatter Points to Other Types of Data]]
@@ Line 85: / Line 166: @@
 :[[GMS:Active/Inactive Points|Active/Inactive Points]]
 :[[GMS:2D Interpolation Options|2D Interpolation Options]]
-:[[GMS:2D Scatter Point Display Options|2D Scatter Point Display Options]]
-:[[GMS:2D Scatter Point Tool Palette|2D Scatter Point Tool Palette]]
-;3.7 3D Mesh Module
+;5.7. 3D Mesh Module
 :[[GMS:3D Mesh Module|3D Mesh Module]]
-:[[GMS:3D Element Types|3D Element Types]]
+:[[GMS:3D Mesh Commands|3D Mesh Commands]]
 :[[GMS:Creating a 3D Mesh|Creating a 3D Mesh]]
 :[[GMS:Editing a 3D Mesh|Editing a 3D Mesh]]
-:[[GMS:Converting 3D Meshes to Other Data Types|Converting 3D Meshes to Other Data Types]]
 :[[GMS:3D Mesh Display Options|3D Mesh Display Options]]
 :[[GMS:3D Mesh Tool Palette|3D Mesh Tool Palette]]
+:[[GMS:Classify Material Zones|Classify Material Zones]]
+:[[GMS:Isosurfaces|Isosurfaces]]
+:[[GMS:Converting 3D Meshes to Other Data Types|Converting 3D Meshes to Other Data Types]]
 ::See "Horizons" and "Solids to Layered Mesh"
-;3.8 3D Grid Module
+;5.8. 3D Grid Module
 :[[GMS:3D Grid Module|3D Grid Module]]
-:[[GMS:3D Grid Types|3D Grid Types]]
+:[[GMS:3D Grid Commands|3D Grid Commands]]
 :[[GMS:Creating and Editing 3D Grids|Creating and Editing 3D Grids]]
+:[[GMS:3D Grid Display Options|3D Grid Display Options]]
+:[[GMS:3D Grid Tool Palette|3D Grid Tool Palette]]
+:[[GMS:Classify Material Zones|Classify Material Zones]]
 :[[GMS:3D Grid Viewing Modes|3D Grid Viewing Modes]]
 :[[GMS:Converting 3D Grids to Other Data Types|Converting 3D Grids to Other Data Types]]
+:[[GMS:Exporting Grids|Exporting Grids]]
 :[[GMS:Cell Properties|Cell Properties]]
-:[[GMS:3D Grid Display Options|3D Grid Display Options]]
+:[[GMS:Active/Inactive Cells|Active/Inactive Cells]]
-:[[GMS:3D Grid Tool Palette|3D Grid Tool Palette]]
+:[[GMS:Named Layer Ranges|Named Layer Ranges]]
-::Connections to MODFLOW, MODPATH, MT3DMS
+:[[GMS:Redistribute Grid Cells|Redistribute Grid Cells]]
+:[[GMS:Redistribute Layers|Redistribute Layers]]
+::See "Isosurfaces"
-;3.9 3D Scatter Point Module
+;5.9. 3D Scatter Point Module
 :[[GMS:3D Scatter Point Module|3D Scatter Point Module]]
+:[[GMS:3D Scatter Point Commands|3D Scatter Point Commands]]
+:[[GMS:3D Scatter Point Display Options|3D Scatter Point Display Options]]
+:[[GMS:3D Scatter Point Tool Palette|3D Scatter Point Tool Palette]]
 :[[GMS:Interpolating with 3D Scatter Points|Interpolating with 3D Scatter Points]]
 :[[GMS:Converting 3D Scatter Points to Other Data Types|Converting 3D Scatter Points to Other Data Types]]
 :[[GMS:Bounding Grid|Bounding Grid]]
-:[[GMS:3D Scatter Point Display Options|3D Scatter Point Display Options]]
-:[[GMS:3D Scatter Point Tool Palette|3D Scatter Point Tool Palette]]
 ::Connection to "Active/Inactive Points", "Inverse Distance Weighted"
-;3.10 Map Module
+;5.10. Map Module
 :[[GMS:Map Module|Map Module]]
 :[[GMS:Feature Objects|Feature Objects]]
 :[[GMS:Conceptual Model|Conceptual Model]]
+:[[GMS:Feature Object Display Options|Feature Object Display Options]]
+:[[GMS:Feature Object Tool Palette|Feature Object Tool Palette]]
 :[[GMS:Coverages|Coverages]]
+:[[GMS:Grid Frame|Grid Frame]]
 :[[GMS:Clean Command|Clean Command]]
-:[[GMS:Feature Object Display Options|Feature Object Display Options]]
+:[[GMS:Temporal Discretization|Temporal Discretization]]
-:[[GMS:Feature Object Tool Palette|Feature Object Tool Palette]]
+:[[GMS:Map to Models|Map to Models]]
+:[[GMS:Map to Modules|Map to Modules]]
-;3.11 GIS Module
+;5.11. GIS Module
 :[[GMS:GIS Module|GIS Module]]
+:[[GMS:GIS Commands|GIS Commands]]
+:[[GMS:GIS Display Options|GIS Display Options]]
+:[[GMS:GIS Tool Palette|GIS Tool Palette]]
 :[[GMS:Enabling ArcObjects|Enabling ArcObjects]]
-::[[ArcObjects|ArcObjects]]
 :[[GMS:GIS to Feature Objects|GIS to Feature Objects]]
-::[[GIS to Feature Objects Wizard|GIS to Feature Objects Wizard]]
 :[[GMS:Add Data|Add Data]]
-:[[GMS:GIS Display Options|GIS Display Options]]
+:[[GMS:Arc Hydro Groundwater|Arc Hydro Groundwater]]
-:[[GMS:GIS Tool Palette|GIS Tool Palette]]
+:[[Shapefiles|Shapefiles]]
+:[[GMS:Images|Images]]
-;4 General Tools
+:[[Registering an Image|Registering an Image]]
-:[[GMS:Units | Units]]
+:[[GMS:Raster Catalog|Raster Catalog]]
-:[[GMS:CAD Options|CAD Options]]
+----
-:[[GMS:Animations | Animations]]
+;6. Models
-:[[Annotations|Annotations]]
+:[[GMS:Numerical Models|Numerical Models]]
-:[[Projections|Projections]]
+;6.1. FEMWATER
-:[[GMS:Contour Options|Contour Options]]
-:[[GMS:Data Set Files|Data Set Files]]
-:[[GMS:Materials|Materials]]
-;5 Interpolation
-:[[GMS:Interpolation | Interpolation]]
-:[[GMS:Linear | Linear]]
-:[[GMS:Inverse Distance Weighted | Inverse Distance Weighted]]
-::[[GMS:Shepards Method | Shepards Method]]
-::[[GMS:Gradient Plane Nodal Functions | Gradient Plane Nodal Functions]]
-::[[GMS:Quadratic Nodal Functions | Quadratic Nodal Functions]]
-::[[GMS:Subset Definition | Subset Definition]]
-:[[GMS:Clough-Tocher|Clough-Tocher]]
-:[[GMS:Natural Neighbor|Natural Neighbor]]
-:[[GMS:Kriging|Kriging]]
-::[[GMS:Kriging Options|Kriging Options]]
-::[[GMS:3D Kriging|3D Kriging]]
-;6 Models
-:[[GMS:Model Checker|Model Checker]]
-;6.1 ART3D
-:[[GMS:ART3D|ART3D]]
-;6.2 FEMWATER
 :[[GMS:FEMWATER|FEMWATER]]
-;6.2.1 Pre-Processing
+:[[GMS:FEMWATER Commands|FEMWATER Commands]]
+;6.1.1. FEMWATER Pre-Processing
 :[[GMS:Building a FEMWATER Model|Building a FEMWATER Model]]
-::[[GMS:FEMWATER Direct Approach|FEMWATER Direct Approach]]
+:[[GMS:FEMWATER Direct Approach|FEMWATER Direct Approach]]
-::[[GMS:FEMWATER Conceptual Model Approach|FEMWATER Conceptual Model Approach]]
+:[[GMS:FEMWATER Conceptual Model Approach|FEMWATER Conceptual Model Approach]]
-:[[GMS:Horizons to 3D Mesh|Horizons to 3D Mesh]]
+:[[GMS:FEMWATER Flows|FEMWATER Flows]]
 :[[GMS:Point Source/Sink BC (Wells)|Point Source/Sink BC]]
 :[[GMS:Assign Node/Face BC|Assign Node/Face BC]]
+:[[GMS:FEMWATER Point / Arc Properties|FEMWATER Point / Arc Properties]]
 :[[GMS:FEMWATER Model Input|FEMWATER Model Input]]
+:[[GMS:FEMWATER Initial Conditions|FEMWATER Initial Conditions]]
 :[[GMS:Saving a FEMWATER Simulation|Saving a FEMWATER Simulation]]
-;6.2.2 Post-Processing
+;6.1.2. FEMWATER Post-Processing
 :[[GMS:FEMWATER Display Options|FEMWATER Display Options]]
-:[[GMS:FEMWATER Post Processing Viewing Options|FEMWATER Post Processing Viewing Options]]
+:[[GMS:FEMWATER Post-Processing Viewing Options|FEMWATER Post-Processing Viewing Options]]
 :[[GMS:FEMWATER Particle Sets|FEMWATER Particle Sets]]
-;6.3 MODAEM
+;6.2. MODAEM
 :[[GMS:MODAEM|MODAEM]]
+:[[GMS:MODAEM Commands|MODAEM Commands]]
 :[[GMS:MODAEM License Agreement|MODAEM License Agreement]]
 :[[GMS:MODAEM Display Options|MODAEM Display Options]]
-;6.4 MODFLOW
+;6.3. MODFLOW
 :[[GMS:MODFLOW|MODFLOW]]
-;6.4.1 GMS MODFLOW Packages
+:[[GMS:MODFLOW-2005|MODFLOW-2005]]
-:[[GMS:LPF Package Dialog|LPF Package Dialog]]
+:[[GMS:MODFLOW-NWT|MODFLOW-NWT]]
-:[[GMS:BCF Package Dialog|BCF Package Dialog]]
+:[[GMS:MODFLOW-LGR|MODFLOW-LGR]]
-:[[GMS:Horizontal Flow Barriers|Horizontal Flow Barriers]]
+:[[GMS:MODFLOW Commands|MODFLOW Commands]]
-:[[GMS:Recharge Package|Recharge Package]]
+;6.3.1. MODFLOW Packages
-:[[GMS:Evapotranspiration Package|Evapotranspiration Package]]
+:[[GMS:MODFLOW Packages Supported in GMS|MODFLOW Packages Supported in GMS]]
-:[[GMS:River Package|River Package]]
+:[[GMS:BCF Package|BCF Package]]
-:[[GMS:Well Package|Well Package]]
+:[[GMS:CHD Package|CHD Package]]
-:[[GMS:Drain Package|Drain Package]]
+:[[GMS:DE4 Package|DE4 Package]]
-:[[GMS:General Head Package|General Head Package]]
+:[[GMS:DRN Package|DRN Package]]
-:[[GMS:Time Variant Specified Head Package|Time Variant Specified Head Package]]
-:[[GMS:SIP Package Dialog|SIP Package Dialog]]
-:[[GMS:PCG2 Package Dialog|PCG2 Package Dialog]]
-:[[GMS:IBOUND|IBOUND]]
-:[[GMS:SSOR Package Dialog|SSOR Package Dialog]]
-:[[GMS:Lake Package|Lake Package]]
-:[[GMS:Evapotranspiration Segments Package|Evapotranspiration Segments Package]]
 :[[GMS:DRT Package|DRT Package]]
-;6.4.2 Pre-Processing
+:[[GMS:ETS Package|ETS Package]]
+:[[GMS:EVT Package|EVT Package]]
+:[[GMS:GAGE Package|GAGE Package]]
+:[[GMS:GHB Package|GHB Package]]
+:[[GMS:Global Options/Basic Package|Global Options/Basic Package]]
+:[[GMS:GMG Package|GMG Package]]
+:[[GMS:HFB Package|HFB Package]]
+:[[GMS:HUF Package|HUF Package]]
+:[[GMS:LAK Package|LAK Package]]
+:[[GMS:LMG Package|LMG Package]]
+:[[GMS:LMG1 Package|LMG1 Package]]
+:[[GMS:LPF Package|LPF Package]]
+:[[GMS:MNW1 Package|MNW1 Package]]
+:[[GMS:MNW2 Package|MNW2 Package]]
+:[[GMS:NWT Package|NWT Package]]
+:[[GMS:PCG Package|PCG Package]]
+:[[GMS:PCGN Package|PCGN Package]]
+:[[GMS:RCH Package|RCH Package]]
+:[[GMS:PEST ASP Package|PEST ASP Package]]
+:[[GMS:RIV Package|RIV Package]]
+:[[GMS:SIP Package|SIP Package]]
+:[[GMS:SSOR Package|SSOR Package]]
+:[[GMS:STR/SFR Packages|STR/SFR Packages]]
+:[[GMS:SUB Package|SUB Package]]
+:[[GMS:UPW Package|UPW Package]]
+:[[GMS:UZF Package|UZF Package]]
+:[[GMS:WEL Package|WEL Package]]
+;6.3.2. MODFLOW Pre-Processing
 :[[GMS:Building a MODFLOW Model|Building a MODFLOW Model]]
+:[[GMS:MODFLOW Array Editor|MODFLOW Array Editor]]
 :[[GMS:MODFLOW Grid Approach|MODFLOW Grid Approach]]
 :[[GMS:MODFLOW Conceptual Model Approach|MODFLOW Conceptual Model Approach]]
-:[[GMS:Defining the Layer Elevations|Defining the Layer Elevations]]
+:[[GMS:Activate Cells in Coverage|Activate Cells in Coverage]]
+:[[GMS:IBOUND|IBOUND]]
+:[[GMS:Stress Periods|Stress Periods]]
+:[[GMS:Map to MODFLOW|Map to MODFLOW]]
+:[[GMS:Defining Layer Elevations|Defining Layer Elevations]]
 :[[GMS:Standard MODFLOW Parameters|Standard MODFLOW Parameters]]
+:[[GMS:MODFLOW Parameters - Two Methods|MODFLOW Parameters - Two Methods]]
+:[[GMS:Conductance|Conductance]]
+:[[GMS:MODFLOW Parameters Disclaimer|MODFLOW Parameters Disclaimer]]
 :[[GMS:Saving and Reading a MODFLOW Simulation|Saving and Reading a MODFLOW Simulation]]
 :[[GMS:Output Control|Output Control]]
 :[[GMS:Importing MODFLOW Files|Importing MODFLOW Files]]
 :[[GMS:MODFLOW with HDF5|MODFLOW with HDF5]]
-:[[GMS:MODFLOW Packages Supported in GMS|MODFLOW Packages Supported in GMS]]
 :[[GMS:Unsupported MODFLOW Features|Unsupported MODFLOW Features]]
 :[[GMS:Interpolate to MODFLOW Layers|Interpolate to MODFLOW Layers]]
+:[[GMS:MODFLOW Source/Sink Dialog|MODFLOW Source/Sink Dialog]]
 ::see "Calibration", "Parameters", "Stochastic Modeling"
-;6.4.3 Post-Processing
+;6.3.3. MODFLOW Post-Processing
 :[[GMS:MODFLOW Display Options|MODFLOW Display Options]]
-:[[GMS:MODFLOW Post Processing Viewing Options|MODFLOW Post Processing Viewing Options]]
+:[[GMS:MODFLOW Post-Processing Viewing Options|MODFLOW Post-Processing Viewing Options]]
+:[[GMS:MODFLOW Solution Properties Dialog|MODFLOW Solution Properties Dialog]]
 :[[GMS:Saving and Reading a MODFLOW Simulation|Saving and Reading a MODFLOW Simulation]]
 :[[GMS:Cell Properties|Cell Properties]]
+:[[GMS:MODFLOW World File|MODFLOW World File]]
+:[[GMS:Error Summary Plot|Error Summary Plot]]
+:[[GMS:Zone Budget|Zone Budget]]
+:[[GMS:ZONEBUDGET|ZONEBUDGET]]
+:[[GMS:Viewing Computed Fluxes|Viewing Computed Fluxes]]
-;6.5 MODPATH
+;6.4. MODPATH
 :[[GMS:MODPATH|MODPATH]]
+:[[GMS:MODPATH Commands|MODPATH Commands]]
 :[[GMS:MODPATH Particle Tracking|MODPATH Particle Tracking]]
 :[[GMS:MODPATH Particle Sets|MODPATH Particle Sets]]
 :[[GMS:MODPATH Zone Codes|MODPATH Zone Codes]]
 :[[GMS:MODPATH Display Options|MODPATH Display Options]]
+:[[GMS:Exporting Pathlines|Exporting Pathlines]]
-;6.6 MT3DMS
+;6.5. MT3DMS
 :[[GMS:MT3DMS|MT3DMS]]
-:[[GMS:MT3D Packages|MT3D Packages]]
+:[[GMS:MT3DMS Commands|MT3DMS Commands]]
+:[[GMS:MT3DMS Packages|MT3DMS Packages]]
+:[[GMS:MT3DMS Source/Sink Mixing Package|MT3DMS Source/Sink Mixing Package]]
 :[[GMS:Basic Transport Package Dialog|Basic Transport Package Dialog]]
-:[[GMS:Source/Sink Mixing Package|Source/Sink Mixing Package]]
+:[[GMS:ICBUND Array|ICBUND Array]]
-:[[GMS:Cell by Cell Editing of Sources/Sinks|Cell by Cell Editing of Sources/Sinks]]
+:[[GMS:MT3DMS Point Sources/Sinks BC|MT3DMS Point Sources/Sinks BC]]
 :[[GMS:Building an MT3DMS Simulation|Building an MT3DMS Simulation]]
 :[[GMS:Saving an MT3DMS Simulation|Saving an MT3DMS Simulation]]
-:[[GMS:Importing an MT3D Simulation|Importing an MT3D Simulation]]
+:[[GMS:Importing an MT3DMS Simulation|Importing an MT3DMS Simulation]]
+:[[GMS:MT3DMS Display Options|MT3DMS Display Options]]
+:[[GMS:Calculate Mass|Calculate Mass]]
-;6.7 PEST
+;6.6. PEST
 :[[GMS:PEST|PEST]]
 ::see "Calibration", "Parameters", "Stochastic Modeling"
-;6.8 RT3D
+;6.7. RT3D
 :[[GMS:RT3D|RT3D]]
 :[[GMS:Basic Transport Package Dialog|Basic Transport Package Dialog]]
 ::see MT3DMS for interface inquiries
-;6.9 SEAM3D
+;6.8. SEAM3D
 :[[GMS:SEAM3D|SEAM3D]]
-:see MT3DMS and RT3D
+::see MT3DMS and RT3D
-;6.10 SEAWAT
+;6.9. SEAWAT
 :[[GMS:SEAWAT|SEAWAT]]
+:[[GMS:SEAWAT Commands|SEAWAT Commands]]
 :[[GMS:Building a SEAWAT Model|Building a SEAWAT Model]]
-:[[GMS:SEAWAT:Global Options Dialog|SEAWAT Global Options Dialog]]
+:[[GMS:SEAWAT Global Options Dialog|SEAWAT Global Options Dialog]]
-:[[GMS:SEAWAT:MODFLOW AUX Variables|SEAWAT MODFLOW AUX Variables]]
+:[[GMS:SEAWAT Packages|SEAWAT Packages]]
-:[[GMS:SEAWAT:Packages|SEAWAT Packages]]
-:[[GMS:SEAWAT:Importing a SEAWAT Simulation|Importing a SEAWAT Simulation]]
 ::see MODFLOW with HDF5
-;6.11 SEEP2D
+;6.10. SEEP2D
 :[[GMS:SEEP2D|SEEP2D]]
+:[[GMS:SEEP2D Commands|SEEP2D Commands]]
 :[[GMS:SEEP2D Display Options|SEEP2D Display Options]]
+:[[GMS:SEEP2D Solution|SEEP2D Solution]]
+:[[GMS:SEEP2D Files|SEEP2D Files]]
-;6.12 T-PROGS
+;6.11. T-PROGS
 :[[GMS:T-PROGS|T-PROGS]]
-:[[GMS:Material Set|Material Set]]
+:[[GMS:T-PROGS Commands|T-PROGS Commands]]
 :[[GMS:Vertical Markov Chain|Vertical Markov Chain]]
 :[[GMS:Strike Dip Markov Chain|Strike Dip Markov Chain]]
+:[[GMS:TSIM|TSIM]]
-;6.13 UTCHEM
+;6.12. UTEXAS
-:[[GMS:UTCHEM|UTCHEM]]
-;6.14 UTEXAS
 :[[GMS:UTEXAS|UTEXAS]]
+:[[GMS:UTEXAS Commands|UTEXAS Commands]]
+:[[GMS:UTEXAS Display Options|UTEXAS Display Options]]
-;7 Modeling
+----
-;7.1 Calibration
+;7. Modeling
+;7.1. Calibration
 :[[GMS:Model Calibration|Model Calibration]]
 :[[GMS:Automated Parameter Estimation|Automated Parameter Estimation]]
-:[[GMS:Parameter Estimation Dialog|Parameter Estimation Dialog]]
+:[[GMS:PEST Dialog|Parameter Estimation Dialog]]
 :[[GMS:PEST|PEST]]
 :[[GMS:Global Options/Basic Package#Run Options|Run Options]]
@@ Line 293: / Line 408: @@
 :[[GMS:Plot Wizard|Plot Wizard]]
 :[[GMS:Calibration Targets|Calibration Targets]]
+:[[GMS:Model Checker|Model Checker]]
-;7.2 Parameters
+;7.2. Parameters
 :[[GMS:Parameters|Parameters]]
 :[[GMS:Parameter Dialog|Parameter Dialog]]
@@ Line 301: / Line 417: @@
 :[[GMS:Standard MODFLOW Parameters|Standard MODFLOW Parameters]]
-;7.3 Stochastic Modeling
+;7.3. Stochastic Modeling
 :[[GMS:Stochastic Modeling|Stochastic Modeling]]
 :[[GMS:Gaussian Field Generator|Gaussian Field Generator]]
 :[[GMS:Risk Analysis Wizard|Risk Analysis Wizard]]
+----
-;8 Importing/Exporting Data
+;8. Importing/Exporting Data
-:[[GMS:Text Import Wizard Supported File Formats|Text Import Wizard Supported File Formats]]
+:[[GMS:Importing Non-native GMS Files|Importing Non-native GMS Files]]
-:[[GMS:Text Import Wizard|Text Import Wizard]]
+:[[GMS:File Import Wizard|File Import Wizard]]
-:[[Import from Web|Import from Web]]
+:[[GMS:File Import Wizard Supported File Formats|File Import Wizard Supported File Formats]]
 :[[GMS:Importing/Exporting CAD Data|Importing/Exporting CAD Data]]
-:[[GMS:Import From Database|Import From Database]]
+:[[GMS:Importing USGS DEMs | Importing USGS DEMs]]
-:[[GMS:Exporting Non-native GMS Files|Exporting Non-native GMS Files]]
-:[[GMS:Data Set Files|Data Set Files]]
 :[[GMS:Importing/Exporting GIS Grids|Importing/Exporting GIS Grids]]
 :[[GMS:Importing/Exporting Shapefiles|Importing/Exporting Shapefiles]]
-:[[GMS:Images | Images]]
+:[[GMS:Exporting Non-native GMS Files|Exporting Non-native GMS Files]]
-:[[GMS:Importing USGS DEMs | Importing USGS DEMs]]
-:[[Registering an Image|Registering an Image]]
-:[[Shapefiles|Shapefiles]]
 :[[KMZ files|KMZ files]]
+:[[GMS:GeoStudio Import|GeoStudio Import]]
-;9 APPENDIX
+----
+;9. Appendix
 :[[GMS:File Formats|File Formats]]
-:[[GMS:Version History|Version History]]
+:[[GMS:Dataset Files|Dataset Files]]
-:[[GMS:Feature Requests|Feature Requests]]
+:[[GMS:Release Notes GMS|Release Notes GMS]]
-:[[GMS:Bugfixes GMS|Bugfixes GMS]]
+:[[GMS:GMS_9.0_Dialog_Help|Dialog Help]]